CDS

Accession Number TCMCG042C46535
gbkey CDS
Protein Id XP_016478671.1
Location join(1278..1437,1947..2713,2803..3024,3204..3275,3367..3648,3859..4218,4857..5147)
Gene LOC107800043
GeneID 107800043
Organism Nicotiana tabacum

Protein

Length 717aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016623185.1
Definition PREDICTED: cell division cycle protein 48 homolog [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category O
Description Cell division protein 48 (CDC48) domain 2
KEGG_TC 3.A.16.1
KEGG_Module M00400        [VIEW IN KEGG]
M00403        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K13525        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
ko05134        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
map05134        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAACAAGGTTGTCCGTTCAAATTTGAGGGTTCGGCTTGGAGATGTTGTGTCTGTGCACCAATGTCCAGATGTTAAGTATGGAAAACGTGTGCACATACTTCCCATAGATGATACAATAGAAGGTCTCACCGGGGATTTGTTTGATGCATTCTTGAAACCTTACTTTTTGGAAGCATATCGTCCTTTGAGGAAAGGGGACAATTTCCTTGTTAGAGGAGGGATGAGAAGTGTGGAATTTAAAGTCATCGAGACTGACCCTGGGGAGTATTGTGTTGTTGCTCCAGACACAGAAATCTTTTGCGAGGGGGAGCCTGTTAAAAGGGAGGATGAAGAGAGACTGGACGAAGTTGGCTATGATGATGTTGGTGGTGTGAGAAAACAGATGGCTCAGATTCGTGAATTGGTGGAATTACCATTGAGGCATCCGCAGCTTTTTAAATCCATTGGTGTGAAACCACCAAAGGGGATTTTACTTTATGGACCCCCTGGATCTGGGAAGACCCTGATAGCCAGAGCTGTGGCTAATGAAACAGGTGCATTTTTCTTTTGCATTAATGGACCGGAAATCATGTCCAAATTGGCTGGAGAGAGTGAAAGCAATCTCAGGAAGGCATTTGAAGAGGCTGAGAAAAATGCTCCATCTATTATATTCATTGATGAAATTGATTCAATTGCTCCCAAGCGAGAGAAGACACATGGTGAAGTTGAGAGAAGGATTGTTTCACAGCTCCTGACACTGATGGATGGATTGAAATCTCGTGCTCATGTCATAGTTATGGGAGCTACCAATCGTCCTAACAGCATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTTGATAGGGAAATTGACATTGGTGTTCCTGATGAAGTTGGACGCCTTGAAGTTCTTCGTATTCATACCAAGAATATGAAGCTTGCAGAAGAAGTCGATTTGGAAAGAATATCAAAAGATACACATGGTTATGTCGGTGCAGATCTTGCTGCTCTTTGCACTGAAGCTGCACTTCAGTGTATTAGAGAGAAAATGGATGTCATTGATCTTGAAGATGATTCCATTGATGCTGAAATATTGAATTCAATGGCTGTCACGAATGAGCACTTCCAAACTGCTCTAGGAACAAGCAATCCATCCGCATTGCGTGAAACAGTTGTTGAAGTGCCTAATGTCTCATGGGAAGACATTGGAGGCCTTGAAAATGTCAAAAGAGAGCTTCAAGAGACTGTTCAATACCCTGTGGAGCATCCTGAGAAGTTCGAGAAGTTTGGTATGTCACCTTCAAAAGGTGTTCTTTTCTATGGTCCTCCAGGATGTGGGAAAACTCTTCTTGCCAAGGCAATTGCAAATGAATGTCAAGCCAATTTCATCAGTGTCAAAGGACCTGAGCTGCTCACCATGTGGTTTGGAGAGAGCGAGGCCAATGTCCGTGAAATTTTTGACAAGGCCAGACAATCTGCACCCTGTGTCCTCTTCTTTGATGAGCTCGATTCTATTGCTACTCAGAGGGGAAGCAGTGTTGGAGATGCTGGTGGAGCAGCTGATCGGGTTCTGAACCAACTTCTGACTGAAATGGACGGCATGAACGCAAAGAAGACCGTTTTTATAATTGGGGCCACGAACAGGCCTGATATAATTGACCCTGCACTTCTGCGACCTGGTCGACTTGACCAGTTAATTTATATCCCACTCCCAGATGAAGACTCGCGCCATCAGATTTTCAAGGCGTGTCTCAGAAAATCTCCCCTCTCAAAAGATGTCGATTTGAGAGCTCTTGCCAAATATACTCAGGGATTCAGTGGAGCTGATATCACTGAGATCTGTCAACGGGCCTGCAAATATGCCATAAGGGAGAACATTGAGAAAGATATAGAAAAGGAAAGGAAACGAAGCGAGAATCCTGATTCTATGGATGAGGATGCTGATGATGAGATAGCAGAGATTACGCCCTCGCATTTTGAGGAGTCTATGAAGTATGCACGACGAAGTGTGAGTGATGCAGATATACGTAAATACCAGGCATTTGCTCAGACCTTACAGCAATCTCGAGGTTTTGGAACTGAATTTCGGTTTGCTGAGGCAAGTGGTGGGGCTGATGCAACTGACCCCTTTGCAACTTCTAATGCTGGAGCTGATGATGATGACTTGTATAGCTAA
Protein:  
MNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSENPDSMDEDADDEIAEITPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEASGGADATDPFATSNAGADDDDLYS